本家様 https://github.com/StructuralBiology-ICLMedicine/SIDESPLITTER

CCP-EMのNightlyには入っているようだが、ソースからコンパイルしてみる

まず入手

[root@c ~]# cd /apps/src/
[root@c src]# git clone https://github.com/StructuralBiology-ICLMedicine/SIDESPLITTER
Cloning into 'SIDESPLITTER'...
remote: Enumerating objects: 26, done.
remote: Counting objects: 100% (26/26), done.
remote: Compressing objects: 100% (25/25), done.
remote: Total 26 (delta 8), reused 0 (delta 0), pack-reused 0
Unpacking objects: 100% (26/26), done.
[root@c src]#

コンパイルとインストール

[root@c src]# cd SIDESPLITTER/
[root@c SIDESPLITTER]# bash ./compile.sh
 
[root@c SIDESPLITTER]# cp sidesplitter sidesplitter_wrapper.sh  /apps/bin/

初め、cmakeでと思ったのだが、

[root@c SIDESPLITTER]# mkdir b
[root@c SIDESPLITTER]# cd b
[root@c b]# cmake3 ..
-- The C compiler identification is GNU 8.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
CMake Error at CMakeLists.txt:14 (find_package):
  Could not find a package configuration file provided by "FFTW3" with any of
  the following names:
 
    FFTW3Config.cmake
    fftw3-config.cmake
 
  Add the installation prefix of "FFTW3" to CMAKE_PREFIX_PATH or set
  "FFTW3_DIR" to a directory containing one of the above files.  If "FFTW3"
  provides a separate development package or SDK, be sure it has been
  installed.
 
 
-- Configuring incomplete, errors occurred!
See also "/apps/src/SIDESPLITTER/b/CMakeFiles/CMakeOutput.log".
See also "/apps/src/SIDESPLITTER/b/CMakeFiles/CMakeError.log".
[root@c b]#

となったので断念。簡単にすましてみた。

実行

/apps/bin/sidesplitter

で使い方が表示されます。
久々に巨大なAAに何?っておもった

sidesplitter_wrapper.sh

テキストファイルに必要事項が書かれています。


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Last-modified: 2020-01-06 (月) 23:59:23 (12d)