本家様 https://github.com/turonova/novaSTA
Subtomogram averaging package based on TOM/AV3
インストール†
cd /apps/src
git clone https://github.com/turonova/novaSTA
cd novaSTA
module load mpi/openmpi-x86_64
一部makefileを弄る
| --- makefile.orig 2025-03-27 00:11:09.367362833 +0900
+++ makefile 2025-03-27 00:16:46.270548389 +0900
@@ -12,11 +12,11 @@
CXXFLAGS = -std=c++14 #-std=c++0x
CUDA = nvcc
-CUDA_INCLUDES = -I"${cudapath}/include"
+CUDA_INCLUDES = -I"/usr/local/cuda-10.2/include" -I"/usr/include/openmpi-x86_64"
#OBJECTS = $(SOURCES:.cpp=.o)
-LIBRARIES = -lfftw3 -lfftw3f -lpthread -lcudart -lcufft
+LIBRARIES = -lfftw3 -lfftw3f -lpthread -lcudart -lcufft -L/usr/local/cuda-10.2/lib64
all: ${program}
|
っで
make includepath="/usr/local/cuda-10.2/include /usr/include/openmpi-x86_64" -j 20
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