本家様 https://github.com/KosinskiLab/pyTME
pipy https://pypi.org/project/pygame/
下準備
git clone https://github.com/yyuu/pyenv.git /apps/pyenv
export PYENV_ROOT=/apps/pyenv
export PATH=$PYENV_ROOT/bin:$PATH
pyenv install anaconda3-2024.10-1参照先 https://kosinskilab.github.io/pyTME/quickstart/installation.html
構築
[root@rockylinux9 ~]# source /apps/pyenv/versions/anaconda3-2024.10-1/etc/profile.d/conda.sh
[root@rockylinux9 ~]# conda create -n pytme -c conda-forge python=3.11 pyfftw pyqt
[root@rockylinux9 ~]# conda activate pytme
(pytme) [root@rockylinux9 ~]# pip install "pytme[cupy]"
(pytme) [root@rockylinux9 ~]# conda list
:
cupy-cuda12x 13.5.1 pypi_0 pypi
:
numpy 2.3.1 py311h2e04523_1 conda-forge
:
pyfftw 0.15.0 py311h9f3472d_1 conda-forge
:
pyqt 5.15.11 py311he22028a_1 conda-forge
pyqt5-sip 12.17.0 py311hfdbb021_1 conda-forge
pytest 8.4.1 pypi_0 pypi
python 3.11.13 h9e4cc4f_0_cpython conda-forge
python_abi 3.11 8_cp311 conda-forge
pytme 0.3.0 pypi_0 pypi
:
(pytme) [root@rockylinux9 ~]#
(pytme) [root@rockylinux9 ~]# pip install "napari==0.4.19.post1" magicgui git+https://github.com/maurerv/napari-density-io.git